Rat Genes

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    • Center PIs
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  • Cores
    • Core A: Administrative Core
    • Core B: Breeding Core
    • Core C: Sequencing Core
    • Core D: Pilot Projects
  • NIDA Research
    • P50: Neurogenetic Substrates of Cocaine Addiction
    • P50: Socially-acquired nicotine self-administration
    • P50: Association between behavioral regulation and cocaine cue preference
    • P50: Network-based analysis
    • P50: Genetic Studies of Incentive Salience
    • U01: Single-cell resolution analysis of chromatin accessibility and gene expression
    • U01: Genetic Features of Delay Discounting in an HS Rat Model
    • U01: Genetic Basis of Opioid Dependence Vulnerablility
    • U01: Genetics of Novelty seeking and Propensity for Drug Abuse in Outbred Rats
    • U01: Genomic analysis of avoidance learning in addiction
    • U01: Genetics of Compulsive Cocaine Intake in Rats
    • U01: Genetics of Compulsive Oxycodone Intake in HS Rats
  • Affiliated Research
    • Grants spawned by this Center
    • Ancillary Phenotyping
    • Pilot Projects
  • eQTL mapping
  • Meetings
    • NIDA Center for GWAS in Outbred Rats – 6th Annual Retreat
    • NIDA Center for GWAS in Outbred Rats – 5th Annual Retreat
    • Complex Traits Consortium / Rat Genomics 17th Annual Meeting
    • NIDA Center for GWAS in Outbred Rats – 4th Annual Retreat
    • NIDA Center for GWAS in Outbred Rats – Third Annual Retreat
    • Rat Genetics and Genomics for Psychiatric Disorders and Addiction
    • NIDA Center for GWAS in Outbred Rats 2nd Annual Retreat
    • Retreat September 2014
  • Data Sharing
  • Education
    • Research Experiences for High School and Undergraduate Students
      • Summer 2020: Research Experiences for High School and Undergraduate Students
      • Summer 2018: Research Experiences for High School and Undergraduate Students
      • Summer 2017: Research Experiences for High School and Undergraduate Students
      • Summer 2016: Research Experiences for High School and Undergraduate Students
      • Summer 2015: Research Experiences for High School and Undergraduate Students
    • Journal Club
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Meetings

PIs meet monthly to discuss progress and share data.

 

PAST MEETINGS

NIDA Center for GWAS in Outbred Rats. Third Annual Retreat. San Diego, February 6, 2017

NIDA Center for GWAS in Outbred Rats. Second Annual Retreat. Chicago, October 17, 2015

Rat Genetics and Genomics for Psychiatric Disorders and Addiction. Workshop. Chicago, June 29, 2015.

NIDA Center for GWAS in Outbred Rats. First Annual Retreat. Chicago, October 24, 2014

 

 

Updated 05/08/2018

News

  • • RGD is joining GRC, new rat genome assembly renamed as mRatBN7
  • • Dr. Polesskaya receives an academic appointment as a Research Scientist.
  • • New rat genome assembly mRatNor1 is finished and available
  • • 2020 pilot grants awarded
  • • Updates related to COVID19
  • • Dr. Suzanne Mitchell has been featured in the “Mentors receive as much as they give” article by blogs.OSHU.edu

RSS Palmer Lab

  • Katarina Cohen Joins the Palmer Lab October 7, 2020
  • Article Accepted for Publication in PLOS Genetics October 5, 2020
  • Farewell, Dr. Amelie Baud! October 2, 2020
  • Dr. Abraham Palmer’s Article Accepted for Publication in Science Advances September 16, 2020
  • Article Accepted for Publication in GENETICS September 15, 2020
  • Xinzhu Zhou Successfully defends her thesis! August 19, 2020

Events

6th Annual On-line Retreat for the NIDA Center for GWAS in HS Rats 11/01/20 San Diego, CA, UCSD campus, Biomedical Research Facility BRF2
5th Annual Retreat for the NIDA center for GWAS in outbred rats 06/12/19 UCSD campus, Biomedical Research Facility
17th Annual Meeting of the Complex Trait Community 06/09/19 University of California San Diego
NIDA Genetics Consortium Meeting 06/16/18
Fourth Annual Retreat for the P50 Center 06/15/18
See all events

Links and Resources

• Rat genome assembly mRatNor1.1
• Rat Genome Database (RGD)
• Rat Resource & Research Center (RRRC). Rat Models
• Rat Genome Project (RGP)
• The Hybrid Rat Diversity Panel (HRDP)
• GeneNetwork2, a framework for web based genetics
• Cellular Biology of Addiction Course by the Cold Spring Harbor Meeting and Courses program.
• The Optogenetics and Transgenic Technology Core at NIDA.
• National Institute on Drug Abuse (NIDA)
• Mouse Genome Informatics (MGI)
• Omics Portal for Addiction Research (OPAR)
• ZSTAT: Genome-Wide Transcriptional Network Architecture of Drug Use Disorders
• Rat models of human diseases and related phenotypes: a systematic inventory of the causative genes

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