We use color coding to visually represent the genetic contributions of each founder strain in N/NIH heterogeneous stock (HS) rats. This method helps track the inheritance and distribution of alleles from the original strains throughout the HS population, providing clarity in genetic analysis. Each founder strain is assigned a distinct color to simplify genetic mapping. … Read more…
UCSC genome browser now has mRatBN7.2 and they named it rn7!http://genome.ucsc.edu/cgi-bin/hgTracks?db=rn7
We are creating the RatGTEx portal to provide gene expression and eQTL data for different rat tissues. The pilot version of this portal is available at ratgtex.org. In addition to data downloads, it has interactive visualizations that can display results for queried genes, variants, and tissues. It will specify a standard processing pipeline and data formats … Read more…
The Research Experiences for High School and Undergraduate Students (REHU) program of the P50 Genes & Addiction NIDA Center for GWAS in Outbred Rats provided four participants an opportunity to conduct 10-week summer research projects with their mentors in three laboratories of the Center. In addition, REHU students attended journal club, wrote a research paper, … Read more…
The rat and RGD are invited to join the GRC! The name mRatBN7 was selected for this reference, to maintain similarity to the other genomes being sequenced by the VGP and Tree of Life Program, while adding our request for incorporating the strain name. mRatBN7 will be picked up by Ensembl for an initial rapid … Read more…